BamTools::CigarOp Struct Reference

Represents a CIGAR alignment operation. More...

#include <BamAux.h>

List of all members.

Public Member Functions
	CigarOp (const char type= '\0', const uint32_t &length=0)
	constructor
Public Attributes
char	Type
	CIGAR operation type (MIDNSHPX=).
uint32_t	Length
	CIGAR operation length (number of bases).

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Detailed Description

Represents a CIGAR alignment operation.

See also:

http://samtools.sourceforge.net/SAM1.pdf for more details on using CIGAR operations.

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Constructor & Destructor Documentation

BamTools::CigarOp::CigarOp	(	const char	type = '\0',
		const uint32_t &	length = 0
	)			[inline]

constructor

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Member Data Documentation

uint32_t BamTools::CigarOp::Length

CIGAR operation length (number of bases).

char BamTools::CigarOp::Type

CIGAR operation type (MIDNSHPX=).

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The documentation for this struct was generated from the following file:

• BamAux.h