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- b -
BAM_ALIGNMENT_DUPLICATE :
BamTools::Constants
BAM_ALIGNMENT_MATE_REVERSE_STRAND :
BamTools::Constants
BAM_ALIGNMENT_MATE_UNMAPPED :
BamTools::Constants
BAM_ALIGNMENT_PAIRED :
BamTools::Constants
BAM_ALIGNMENT_PROPER_PAIR :
BamTools::Constants
BAM_ALIGNMENT_QC_FAILED :
BamTools::Constants
BAM_ALIGNMENT_READ_1 :
BamTools::Constants
BAM_ALIGNMENT_READ_2 :
BamTools::Constants
BAM_ALIGNMENT_REVERSE_STRAND :
BamTools::Constants
BAM_ALIGNMENT_SECONDARY :
BamTools::Constants
BAM_ALIGNMENT_UNMAPPED :
BamTools::Constants
BAM_BASECODE_A :
BamTools::Constants
BAM_BASECODE_B :
BamTools::Constants
BAM_BASECODE_C :
BamTools::Constants
BAM_BASECODE_D :
BamTools::Constants
BAM_BASECODE_EQUAL :
BamTools::Constants
BAM_BASECODE_G :
BamTools::Constants
BAM_BASECODE_H :
BamTools::Constants
BAM_BASECODE_K :
BamTools::Constants
BAM_BASECODE_M :
BamTools::Constants
BAM_BASECODE_N :
BamTools::Constants
BAM_BASECODE_R :
BamTools::Constants
BAM_BASECODE_S :
BamTools::Constants
BAM_BASECODE_T :
BamTools::Constants
BAM_BASECODE_V :
BamTools::Constants
BAM_BASECODE_W :
BamTools::Constants
BAM_BASECODE_Y :
BamTools::Constants
BAM_CIGAR_DEL :
BamTools::Constants
BAM_CIGAR_DEL_CHAR :
BamTools::Constants
BAM_CIGAR_HARDCLIP :
BamTools::Constants
BAM_CIGAR_HARDCLIP_CHAR :
BamTools::Constants
BAM_CIGAR_INS :
BamTools::Constants
BAM_CIGAR_INS_CHAR :
BamTools::Constants
BAM_CIGAR_LOOKUP :
BamTools::Constants
BAM_CIGAR_MASK :
BamTools::Constants
BAM_CIGAR_MATCH :
BamTools::Constants
BAM_CIGAR_MATCH_CHAR :
BamTools::Constants
BAM_CIGAR_MISMATCH :
BamTools::Constants
BAM_CIGAR_MISMATCH_CHAR :
BamTools::Constants
BAM_CIGAR_PAD :
BamTools::Constants
BAM_CIGAR_PAD_CHAR :
BamTools::Constants
BAM_CIGAR_REFSKIP :
BamTools::Constants
BAM_CIGAR_REFSKIP_CHAR :
BamTools::Constants
BAM_CIGAR_SEQMATCH :
BamTools::Constants
BAM_CIGAR_SEQMATCH_CHAR :
BamTools::Constants
BAM_CIGAR_SHIFT :
BamTools::Constants
BAM_CIGAR_SOFTCLIP :
BamTools::Constants
BAM_CIGAR_SOFTCLIP_CHAR :
BamTools::Constants
BAM_CORE_BUFFER_SIZE :
BamTools::Constants
BAM_CORE_SIZE :
BamTools::Constants
BAM_DNA_A :
BamTools::Constants
BAM_DNA_B :
BamTools::Constants
BAM_DNA_C :
BamTools::Constants
BAM_DNA_D :
BamTools::Constants
BAM_DNA_DEL :
BamTools::Constants
BAM_DNA_EQUAL :
BamTools::Constants
BAM_DNA_G :
BamTools::Constants
BAM_DNA_H :
BamTools::Constants
BAM_DNA_K :
BamTools::Constants
BAM_DNA_LOOKUP :
BamTools::Constants
BAM_DNA_M :
BamTools::Constants
BAM_DNA_N :
BamTools::Constants
BAM_DNA_PAD :
BamTools::Constants
BAM_DNA_R :
BamTools::Constants
BAM_DNA_S :
BamTools::Constants
BAM_DNA_T :
BamTools::Constants
BAM_DNA_V :
BamTools::Constants
BAM_DNA_W :
BamTools::Constants
BAM_DNA_Y :
BamTools::Constants
BAM_HEADER_MAGIC :
BamTools::Constants
BAM_HEADER_MAGIC_LENGTH :
BamTools::Constants
BAM_SIZEOF_INT :
BamTools::Constants
BAM_TAG_ARRAYBASE_SIZE :
BamTools::Constants
BAM_TAG_TAGSIZE :
BamTools::Constants
BAM_TAG_TYPE_ARRAY :
BamTools::Constants
BAM_TAG_TYPE_ASCII :
BamTools::Constants
BAM_TAG_TYPE_FLOAT :
BamTools::Constants
BAM_TAG_TYPE_HEX :
BamTools::Constants
BAM_TAG_TYPE_INT16 :
BamTools::Constants
BAM_TAG_TYPE_INT32 :
BamTools::Constants
BAM_TAG_TYPE_INT8 :
BamTools::Constants
BAM_TAG_TYPE_STRING :
BamTools::Constants
BAM_TAG_TYPE_UINT16 :
BamTools::Constants
BAM_TAG_TYPE_UINT32 :
BamTools::Constants
BAM_TAG_TYPE_UINT8 :
BamTools::Constants
BAM_TAG_TYPESIZE :
BamTools::Constants
BGZF_BLOCK_FOOTER_LENGTH :
BamTools::Constants
BGZF_BLOCK_HEADER_LENGTH :
BamTools::Constants
BGZF_DEFAULT_BLOCK_SIZE :
BamTools::Constants
BGZF_ID1 :
BamTools::Constants
BGZF_ID2 :
BamTools::Constants
BGZF_LEN :
BamTools::Constants
BGZF_MAX_BLOCK_SIZE :
BamTools::Constants
BGZF_XLEN :
BamTools::Constants
- c -
CM_DEFLATE :
BamTools::Constants
- f -
FLG_FEXTRA :
BamTools::Constants
- g -
GZIP_ID1 :
BamTools::Constants
GZIP_ID2 :
BamTools::Constants
GZIP_WINDOW_BITS :
BamTools::Constants
- o -
OS_UNKNOWN :
BamTools::Constants
- s -
SAM_CO_BEGIN_TOKEN :
BamTools::Constants
SAM_COLON :
BamTools::Constants
SAM_CURRENT_VERSION :
BamTools::Constants
SAM_DIGITS :
BamTools::Constants
SAM_EQUAL :
BamTools::Constants
SAM_HD_BEGIN_TOKEN :
BamTools::Constants
SAM_HD_GROUPORDER_NONE :
BamTools::Constants
SAM_HD_GROUPORDER_QUERY :
BamTools::Constants
SAM_HD_GROUPORDER_REFERENCE :
BamTools::Constants
SAM_HD_GROUPORDER_TAG :
BamTools::Constants
SAM_HD_SORTORDER_COORDINATE :
BamTools::Constants
SAM_HD_SORTORDER_QUERYNAME :
BamTools::Constants
SAM_HD_SORTORDER_TAG :
BamTools::Constants
SAM_HD_SORTORDER_UNKNOWN :
BamTools::Constants
SAM_HD_SORTORDER_UNSORTED :
BamTools::Constants
SAM_HD_VERSION_TAG :
BamTools::Constants
SAM_PERIOD :
BamTools::Constants
SAM_PG_BEGIN_TOKEN :
BamTools::Constants
SAM_PG_COMMANDLINE_TAG :
BamTools::Constants
SAM_PG_ID_TAG :
BamTools::Constants
SAM_PG_NAME_TAG :
BamTools::Constants
SAM_PG_PREVIOUSPROGRAM_TAG :
BamTools::Constants
SAM_PG_VERSION_TAG :
BamTools::Constants
SAM_RG_BEGIN_TOKEN :
BamTools::Constants
SAM_RG_DESCRIPTION_TAG :
BamTools::Constants
SAM_RG_FLOWORDER_TAG :
BamTools::Constants
SAM_RG_ID_TAG :
BamTools::Constants
SAM_RG_KEYSEQUENCE_TAG :
BamTools::Constants
SAM_RG_LIBRARY_TAG :
BamTools::Constants
SAM_RG_PLATFORMUNIT_TAG :
BamTools::Constants
SAM_RG_PREDICTEDINSERTSIZE_TAG :
BamTools::Constants
SAM_RG_PRODUCTIONDATE_TAG :
BamTools::Constants
SAM_RG_PROGRAM_TAG :
BamTools::Constants
SAM_RG_SAMPLE_TAG :
BamTools::Constants
SAM_RG_SEQCENTER_TAG :
BamTools::Constants
SAM_RG_SEQTECHNOLOGY_CAPILLARY :
BamTools::Constants
SAM_RG_SEQTECHNOLOGY_HELICOS :
BamTools::Constants
SAM_RG_SEQTECHNOLOGY_ILLUMINA :
BamTools::Constants
SAM_RG_SEQTECHNOLOGY_IONTORRENT :
BamTools::Constants
SAM_RG_SEQTECHNOLOGY_LS454 :
BamTools::Constants
SAM_RG_SEQTECHNOLOGY_PACBIO :
BamTools::Constants
SAM_RG_SEQTECHNOLOGY_SOLID :
BamTools::Constants
SAM_RG_SEQTECHNOLOGY_TAG :
BamTools::Constants
SAM_SQ_ASSEMBLYID_TAG :
BamTools::Constants
SAM_SQ_BEGIN_TOKEN :
BamTools::Constants
SAM_SQ_CHECKSUM_TAG :
BamTools::Constants
SAM_SQ_LENGTH_MAX :
BamTools::Constants
SAM_SQ_LENGTH_MIN :
BamTools::Constants
SAM_SQ_LENGTH_TAG :
BamTools::Constants
SAM_SQ_NAME_TAG :
BamTools::Constants
SAM_SQ_SPECIES_TAG :
BamTools::Constants
SAM_SQ_URI_TAG :
BamTools::Constants
SAM_STAR :
BamTools::Constants
SAM_TAB :
BamTools::Constants
- z -
Z_DEFAULT_MEM_LEVEL :
BamTools::Constants
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